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Microrheology with Fluorescence Correlation Spectroscopy
Kábrtová, Petra ; Sedláček, Petr (referee) ; Mondek, Jakub (advisor)
A comparison of three passive microrheological techniques was made with the emphasis on FCS. Fluorescently labelled and unlabelled polystyrene particles were used to probe a microrheological response of glycerol solutions, Mili-Q water and sodium hyaluronate solutions. In addition, for FCS technique an approximated equation for calculation of MSD values was derived and verified. It was found that FCS outmatches current microrheological techniques of DLS and video-based particle tracking by its ability to gain a broader data range including the area in which, until now, it was impossible to describe a microrheological behaviour of samples reliably.
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Microrheology modeling with COMSOL Multiphysics package
Koláček, Jakub ; Sedláček, Petr (referee) ; Pekař, Miloslav (advisor)
This bachelor thesis focuses on modeling Brownian motion using the COMSOL Multiphysics package and its Particle Tracing module. The aim of the work is to design and create elementary models that will be able to suitably simulate the movement of microparticles in viscous and viscoelastic environments, which can later be used for modeling passive microrheology. Within this work, Matlab scripts were created for the calculation of MSD from the simulation results, validation of the viscous model was performed on experimental data and elementary models for the simulation of the viscoelastic environment were also designed. Two different approaches were chosen for the design of these models, namely the use of rigid obstacles under the assumption of a discrete environment and a mathematical model assuming continuous environment. Data from the viscous model showed good agreement with the experimental results. The results of viscoelastic simulations are presented, and further possible development of these models is discussed. The continuous mathematical model is considered closest to modeling viscoelastic behavior because of a characteristic curvature that was observed in the evaluation of MSD.
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Modelling of particle movement in liquid and hydrogel media
Orság, Miroslav ; Sedláček, Petr (referee) ; Pekař, Miloslav (advisor)
Main goal of this thesis was to became familiar with general mathematical description of particle motion in fluid and hydrogel media in COMSOL software. Simulate a basic Brownian motion of particles with various diameter in media with different density. According to software options, simulate motion in polymer structure or in viscoelastic media. Consider an options of the model for use in microrheology and suggest next process in this field.
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Optimalization of techniques of microrheology for characterization of biopolymer hydrogels
Dušenková, Alica ; Smilek, Jiří (referee) ; Sedláček, Petr (advisor)
The main aim of the bachelor thesis is optimalization of microrheological techniques for characterization of biopolymer hydrogels. Hydrogels, based on thermoreversible biopolymer agarose, were selected for these experiments. The influence of incorporated poly(sodium 4-styrenesulfonate) on structure and viscoelastic properties of agarose hydrogels was investigated through diffusion coefficient and MSD curves. Microrheological properties were studied by fluorescence correlation spectroscopy, by using fluorescent beads, which were embedded in hydrogel systems.
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Derivatization of Sodium Hyaluronate as a Possible Tool for Increasing of the Stability of Model Artificial Synovial Fluid
Hrochová, Eliška ; Mravec, Filip (referee) ; Kalina, Michal (advisor)
This master thesis deals with the optimization of the procedure of modification of hyaluronic acid structure for the use in the artificial synovial liquids. Based on the literature research, the amino acid alanine was used for the modification of carboxylic group in the glucuronic acid. The main subject of study is the improvement of the stability and mechanical properties of synovial liquid. DLS microrheology, macrorheology, thermogravimetric analysis (TGA), multi-angle light scattering with flow-field flow fractionation (AF4-MALS) and infrared spectroscopy (FTIR) were used for characterization. The theoretical part of this theses submits review of the musculoskeletal system, role of hyaluronic acid in metabolism and summary of synovial liquid. The experimental part focuses on the measurement of the stability and mechanical properties of three artificial samples (first with no modification, second with modified hyaluronic acid and third with modified hyaluronic acid and chondroitin sulphate). These samples were compared with real horse synovial fluid and artificial viscosupplement Orthovisc®.
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Microrheology in study of biopolmer colloids.
Hnyluchová, Zuzana ; Sedláček, Petr (referee) ; Mravec, Filip (advisor)
A new method for determining the viscoelastic properties of materials was introduced and investigated. Results of three groups of samples obtained using one particle microrheology method, DLS microrheology method and classical rheology method were compared to be sure of correctness of measurements. As a model system were chosen mixtures of glycerol of different viscosities. In case of samples containing glycerol, results were also compared with tabulated values. Hyaluronan of various molecular weights was used as a biopolymer and polystyrene particles were used for microrheology. It was confirmed, that viscosity values of biopolymer samples obtaining by each method are comparable.
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Passive microrheology of colloidal systems based on biopolymers.
Bjalončíková, Petra ; Burgert, Ladislav (referee) ; Mravec, Filip (advisor)
Diploma thesis was aimed to deal with evaluation of microrheology method in the research of biopolymer-protein. Used biopolymer was sodium hyaluronate and proteins were trypsin and chymotrypsin. For measuring of microrheology were used particles with different radius (0,5 m and 1 m). It was found, that both substances have viscous charakter. Passive microrheology is suitable for measuring the viscoelastic properties of biopolymers.
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Microrheological study hyaluronan solutions after exposure to low temperatures
Habánková, Eva ; Sedláček, Petr (referee) ; Mravec, Filip (advisor)
The aim of this bachelor thesis is to study the influence of a repeated freezing and thawing process to hyaluronan solutions. The thesis is meant to determine if repeatedly exposing hyaluronan solutions to low temperatures may change the arrangement of the polymer chains and develop weak interactions between these chains. In the thesis the applicability of the two microrheological methods was verified and these were single particle microrheology and dynamic light scattering. For microrheological measurements we used polystyrene particles with a diameter of 0,5 m. There was an effort to determine changes in the structure of hyaluronan solutions by changing the dependence of mean square displacement of particles on time and by changing viscosity of the hyaluronan solutions. Infrared spectroscopy was used as the accompanying method but it proved to be unsuitable for this purpose.
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The Utilization of Light Scattering Techniques for the Study on Hydrogel Gelation
Candráková, Simona ; Smilek, Jiří (referee) ; Kalina, Michal (advisor)
This bachelor thesis focuses on the study of hydrogel gelation using light scattering methods. For these purposes two different biopolymers (agarose and sodium alginate), with different sol to gelation phase transition, were selected. In the case of agarose, the gelation is caused by temperature change. On the other side, the gelation of sodium alginate is initiated by addition of polyvalent cations. In the experimental part of the work, agarose gelation was studied by DLS, temperature gradients of agarose solutions (40 – 30 °C) were measured. During the measurement the particle size distributions in the solutions having different concentrations were monitored as well as the temperature influence on the diffusion coefficient. The DLS method provided the values of the gelling temperatures of the solutions at a concentration of 0,5 wt.% and 1,0 wt.%. Furthermore, the DLS microrheology method was used, where temperature dependences of viscoelastic characteristics of agarose solutions (40 – 30 °C) were also measured, from which the gelling temperatures of agarose solutions of 0,1 wt.% and 0,5 wt.% were evaluated. The classical rheology was also used in the work to compare the viscoelastic behaviour of the samples and to determine the gelation point of the agarose solutions. By this method were determined gelling temperatures for all studied concentration of agarose (0,1 wt.%, 0,5 wt.% and 1,0 wt.%). The DLS method was also used to monitor the interactions of sodium alginate with the addition of Ca2+ ions, these interactions were then also evaluated and discussed in the experimental part.
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